Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sox1P53783 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox1P53783 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.45□□□□□ -0.26
Sox1P53783 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.45□□□□□ -0.26
Sox1P53783 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox1P53783 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox1P53783 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.45□□□□□ -0.26
Sox1P53783 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Gm5369-201ENSMUST00000217499 588 ntBASIC13.45□□□□□ -0.26
Sox1P53783 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sox1P53783 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.45□□□□□ -0.26
Sox1P53783 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox1P53783 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox1P53783 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox1P53783 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.44□□□□□ -0.26
Sox1P53783 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox1P53783 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Sox1P53783 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sox1P53783 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.44□□□□□ -0.26
Sox1P53783 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.44□□□□□ -0.26
Sox1P53783 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Sox1P53783 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.44□□□□□ -0.26
Sox1P53783 Gm25072-201ENSMUST00000175233 235 ntBASIC13.44□□□□□ -0.26
Sox1P53783 Gm23153-201ENSMUST00000175323 313 ntBASIC13.44□□□□□ -0.26
Sox1P53783 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Gm34023-201ENSMUST00000195539 217 ntBASIC13.44□□□□□ -0.26
Sox1P53783 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.44□□□□□ -0.26
Sox1P53783 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.44□□□□□ -0.26
Sox1P53783 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Sox1P53783 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.44□□□□□ -0.26
Sox1P53783 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.44□□□□□ -0.26
Sox1P53783 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox1P53783 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox1P53783 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox1P53783 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.43□□□□□ -0.26
Sox1P53783 Gm11450-201ENSMUST00000121144 333 ntBASIC13.43□□□□□ -0.26
Sox1P53783 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sox1P53783 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sox1P53783 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sox1P53783 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Rmrp-201ENSMUST00000157463 271 ntBASIC13.43□□□□□ -0.26
Sox1P53783 Gm25043-201ENSMUST00000158604 212 ntBASIC13.43□□□□□ -0.26
Sox1P53783 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.43□□□□□ -0.26
Sox1P53783 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.43□□□□□ -0.26
Sox1P53783 Gm9358-201ENSMUST00000183067 927 ntBASIC13.43□□□□□ -0.26
Sox1P53783 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Sox1P53783 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.43□□□□□ -0.26
Sox1P53783 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.43□□□□□ -0.26
Sox1P53783 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.43□□□□□ -0.26
Sox1P53783 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.43□□□□□ -0.26
Sox1P53783 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox1P53783 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms