Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.61□□□□□ -0.55
GdnfP48540 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
GdnfP48540 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Gm15460-201ENSMUST00000118147 391 ntBASIC11.61□□□□□ -0.55
GdnfP48540 Gm12151-201ENSMUST00000121374 290 ntBASIC11.61□□□□□ -0.55
GdnfP48540 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
GdnfP48540 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.61□□□□□ -0.55
GdnfP48540 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
GdnfP48540 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.61□□□□□ -0.55
GdnfP48540 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
GdnfP48540 Gm44872-201ENSMUST00000207864 420 ntBASIC11.61□□□□□ -0.55
GdnfP48540 Gm18027-201ENSMUST00000218947 619 ntBASIC11.61□□□□□ -0.55
GdnfP48540 Gm9229-201ENSMUST00000222777 126 ntBASIC11.61□□□□□ -0.55
GdnfP48540 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.61□□□□□ -0.55
GdnfP48540 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.61□□□□□ -0.55
GdnfP48540 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
GdnfP48540 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
GdnfP48540 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.61□□□□□ -0.55
GdnfP48540 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
GdnfP48540 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.6□□□□□ -0.55
GdnfP48540 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
GdnfP48540 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
GdnfP48540 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
GdnfP48540 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.6□□□□□ -0.55
GdnfP48540 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.6□□□□□ -0.55
GdnfP48540 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.6□□□□□ -0.55
GdnfP48540 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.6□□□□□ -0.55
GdnfP48540 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.6□□□□□ -0.55
GdnfP48540 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.6□□□□□ -0.55
GdnfP48540 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.6□□□□□ -0.55
GdnfP48540 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.6□□□□□ -0.55
GdnfP48540 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.6□□□□□ -0.55
GdnfP48540 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
GdnfP48540 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.59□□□□□ -0.55
GdnfP48540 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
GdnfP48540 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.59□□□□□ -0.55
GdnfP48540 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.59□□□□□ -0.55
GdnfP48540 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.59□□□□□ -0.55
GdnfP48540 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Gm15920-201ENSMUST00000118998 402 ntBASIC11.59□□□□□ -0.55
GdnfP48540 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms