Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Rfx3P48381 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.97□□□□□ -0.49
Rfx3P48381 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.97□□□□□ -0.49
Rfx3P48381 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfx3P48381 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Rfx3P48381 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.96□□□□□ -0.49
Rfx3P48381 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rfx3P48381 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.96□□□□□ -0.49
Rfx3P48381 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Rfx3P48381 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.96□□□□□ -0.49
Rfx3P48381 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Rfx3P48381 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Rfx3P48381 Mir7684-201ENSMUST00000183858 60 ntBASIC11.96□□□□□ -0.49
Rfx3P48381 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rfx3P48381 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.96□□□□□ -0.49
Rfx3P48381 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.96□□□□□ -0.49
Rfx3P48381 Gm20445-201ENSMUST00000061905 565 ntBASIC11.96□□□□□ -0.49
Rfx3P48381 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Rfx3P48381 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rfx3P48381 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rfx3P48381 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rfx3P48381 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rfx3P48381 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rfx3P48381 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rfx3P48381 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rfx3P48381 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rfx3P48381 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.96□□□□□ -0.5
Rfx3P48381 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rfx3P48381 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rfx3P48381 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.96□□□□□ -0.5
Rfx3P48381 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.96□□□□□ -0.5
Rfx3P48381 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.96□□□□□ -0.5
Rfx3P48381 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Rfx3P48381 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Rfx3P48381 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Gm27838-201ENSMUST00000184829 128 ntBASIC11.95□□□□□ -0.5
Rfx3P48381 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Gm20949-201ENSMUST00000206478 952 ntBASIC11.95□□□□□ -0.5
Rfx3P48381 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.95□□□□□ -0.5
Rfx3P48381 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Rfx3P48381 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rfx3P48381 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfx3P48381 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.94□□□□□ -0.5
Rfx3P48381 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rfx3P48381 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfx3P48381 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rfx3P48381 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rfx3P48381 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Rfx3P48381 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms