Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.93□□□□□ -0.66
Hist1h1aP43275 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Hist1h1aP43275 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.93□□□□□ -0.66
Hist1h1aP43275 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.93□□□□□ -0.66
Hist1h1aP43275 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Hist1h1aP43275 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Syt7-205ENSMUST00000224135 1557 ntBASIC10.93□□□□□ -0.66
Hist1h1aP43275 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.93□□□□□ -0.66
Hist1h1aP43275 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist1h1aP43275 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.92□□□□□ -0.66
Hist1h1aP43275 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.92□□□□□ -0.66
Hist1h1aP43275 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm15770-201ENSMUST00000117498 584 ntBASIC10.92□□□□□ -0.66
Hist1h1aP43275 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm6736-201ENSMUST00000166583 948 ntBASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm24420-201ENSMUST00000176676 59 ntBASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm27702-201ENSMUST00000184512 56 ntBASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.92□□□□□ -0.66
Hist1h1aP43275 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist1h1aP43275 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hist1h1aP43275 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hist1h1aP43275 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms