Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TfamP40630 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TfamP40630 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.83□□□□□ -0.36
TfamP40630 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Mir7684-201ENSMUST00000183858 60 ntBASIC12.83□□□□□ -0.36
TfamP40630 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.83□□□□□ -0.36
TfamP40630 Gm45841-201ENSMUST00000207700 164 ntBASIC12.83□□□□□ -0.36
TfamP40630 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.83□□□□□ -0.36
TfamP40630 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Gm9797-201ENSMUST00000052902 613 ntBASIC12.83□□□□□ -0.36
TfamP40630 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TfamP40630 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TfamP40630 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TfamP40630 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TfamP40630 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TfamP40630 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TfamP40630 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TfamP40630 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.82□□□□□ -0.36
TfamP40630 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.82□□□□□ -0.36
TfamP40630 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.82□□□□□ -0.36
TfamP40630 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.82□□□□□ -0.36
TfamP40630 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.82□□□□□ -0.36
TfamP40630 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.82□□□□□ -0.36
TfamP40630 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TfamP40630 Mir8102-201ENSMUST00000184148 139 ntBASIC12.82□□□□□ -0.36
TfamP40630 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.82□□□□□ -0.36
TfamP40630 Gm5279-201ENSMUST00000199575 745 ntBASIC12.82□□□□□ -0.36
TfamP40630 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
TfamP40630 Gm44872-201ENSMUST00000207864 420 ntBASIC12.82□□□□□ -0.36
TfamP40630 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
TfamP40630 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.82□□□□□ -0.36
TfamP40630 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TfamP40630 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TfamP40630 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TfamP40630 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TfamP40630 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.81□□□□□ -0.36
TfamP40630 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TfamP40630 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.81□□□□□ -0.36
TfamP40630 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.81□□□□□ -0.36
TfamP40630 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Mir7221-201ENSMUST00000184009 72 ntBASIC12.81□□□□□ -0.36
TfamP40630 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.81□□□□□ -0.36
TfamP40630 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TfamP40630 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TfamP40630 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TfamP40630 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
TfamP40630 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TfamP40630 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TfamP40630 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms