Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cxcl12P40224 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.53□□□□□ -0.24
Cxcl12P40224 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.53□□□□□ -0.24
Cxcl12P40224 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.53□□□□□ -0.24
Cxcl12P40224 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.53□□□□□ -0.24
Cxcl12P40224 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cxcl12P40224 Gm10312-201ENSMUST00000078515 489 ntBASIC13.53□□□□□ -0.24
Cxcl12P40224 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cxcl12P40224 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.53□□□□□ -0.24
Cxcl12P40224 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.53□□□□□ -0.24
Cxcl12P40224 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cxcl12P40224 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cxcl12P40224 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl12P40224 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl12P40224 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.52□□□□□ -0.25
Cxcl12P40224 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.52□□□□□ -0.25
Cxcl12P40224 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.52□□□□□ -0.25
Cxcl12P40224 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.52□□□□□ -0.25
Cxcl12P40224 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Cxcl12P40224 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Cxcl12P40224 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cxcl12P40224 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cxcl12P40224 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.52□□□□□ -0.25
Cxcl12P40224 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.52□□□□□ -0.25
Cxcl12P40224 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.52□□□□□ -0.25
Cxcl12P40224 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl12P40224 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cxcl12P40224 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm8566-201ENSMUST00000120174 465 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm14704-201ENSMUST00000120300 874 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm12208-201ENSMUST00000122004 163 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm24749-201ENSMUST00000157838 343 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Cxcl12P40224 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cxcl12P40224 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.51□□□□□ -0.25
Cxcl12P40224 Rprl1-202ENSMUST00000198476 238 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm45224-201ENSMUST00000208203 414 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm45925-201ENSMUST00000218882 744 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.51□□□□□ -0.25
Cxcl12P40224 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.51□□□□□ -0.25
Cxcl12P40224 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl12P40224 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms