Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HmgclP38060 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.03□□□□□ -0.32
HmgclP38060 Gm12490-201ENSMUST00000120255 560 ntBASIC13.03□□□□□ -0.32
HmgclP38060 Gm12138-201ENSMUST00000122180 951 ntBASIC13.03□□□□□ -0.32
HmgclP38060 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.03□□□□□ -0.32
HmgclP38060 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.03□□□□□ -0.32
HmgclP38060 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.03□□□□□ -0.32
HmgclP38060 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.03□□□□□ -0.32
HmgclP38060 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
HmgclP38060 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HmgclP38060 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
HmgclP38060 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.03□□□□□ -0.32
HmgclP38060 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HmgclP38060 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HmgclP38060 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HmgclP38060 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HmgclP38060 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HmgclP38060 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HmgclP38060 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
HmgclP38060 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HmgclP38060 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HmgclP38060 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HmgclP38060 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HmgclP38060 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
HmgclP38060 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
HmgclP38060 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HmgclP38060 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HmgclP38060 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.02□□□□□ -0.33
HmgclP38060 Gm16202-201ENSMUST00000117532 544 ntBASIC13.02□□□□□ -0.33
HmgclP38060 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.02□□□□□ -0.33
HmgclP38060 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.02□□□□□ -0.33
HmgclP38060 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.02□□□□□ -0.33
HmgclP38060 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.02□□□□□ -0.33
HmgclP38060 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HmgclP38060 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.02□□□□□ -0.33
HmgclP38060 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HmgclP38060 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HmgclP38060 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.02□□□□□ -0.33
HmgclP38060 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HmgclP38060 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HmgclP38060 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.01□□□□□ -0.33
HmgclP38060 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HmgclP38060 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.01□□□□□ -0.33
HmgclP38060 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.01□□□□□ -0.33
HmgclP38060 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.01□□□□□ -0.33
HmgclP38060 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Gm9002-201ENSMUST00000178437 499 ntBASIC13.01□□□□□ -0.33
HmgclP38060 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.01□□□□□ -0.33
HmgclP38060 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.01□□□□□ -0.33
HmgclP38060 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HmgclP38060 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.01□□□□□ -0.33
HmgclP38060 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.01□□□□□ -0.33
HmgclP38060 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms