Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.19□□□□□ -0.46
Sftpa1P35242 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Gm12566-201ENSMUST00000121479 359 ntBASIC12.19□□□□□ -0.46
Sftpa1P35242 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.19□□□□□ -0.46
Sftpa1P35242 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Gm17208-201ENSMUST00000168388 535 ntBASIC12.19□□□□□ -0.46
Sftpa1P35242 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Gm42997-202ENSMUST00000200321 985 ntBASIC12.19□□□□□ -0.46
Sftpa1P35242 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Gm18212-201ENSMUST00000211678 889 ntBASIC12.19□□□□□ -0.46
Sftpa1P35242 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.19□□□□□ -0.46
Sftpa1P35242 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sftpa1P35242 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sftpa1P35242 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Gm12134-201ENSMUST00000122109 520 ntBASIC12.18□□□□□ -0.46
Sftpa1P35242 Gm13570-201ENSMUST00000140763 309 ntBASIC12.18□□□□□ -0.46
Sftpa1P35242 Gm22334-201ENSMUST00000158070 133 ntBASIC12.18□□□□□ -0.46
Sftpa1P35242 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Gm24514-201ENSMUST00000174961 285 ntBASIC12.18□□□□□ -0.46
Sftpa1P35242 Mir6927-201ENSMUST00000184494 71 ntBASIC12.18□□□□□ -0.46
Sftpa1P35242 Gm38317-201ENSMUST00000195564 343 ntBASIC12.18□□□□□ -0.46
Sftpa1P35242 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Gm32025-201ENSMUST00000217960 307 ntBASIC12.18□□□□□ -0.46
Sftpa1P35242 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.18□□□□□ -0.46
Sftpa1P35242 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.18□□□□□ -0.46
Sftpa1P35242 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sftpa1P35242 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Gm11531-201ENSMUST00000117614 555 ntBASIC12.17□□□□□ -0.46
Sftpa1P35242 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Gm13461-201ENSMUST00000120980 662 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms