Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.39□□□□□ -0.59
Slc6a1P31648 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.39□□□□□ -0.59
Slc6a1P31648 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Slc6a1P31648 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.39□□□□□ -0.59
Slc6a1P31648 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Slc6a1P31648 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Slc6a1P31648 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Slc6a1P31648 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Slc6a1P31648 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Slc6a1P31648 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.39□□□□□ -0.59
Slc6a1P31648 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc6a1P31648 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.38□□□□□ -0.59
Slc6a1P31648 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Slc6a1P31648 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Slc6a1P31648 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.38□□□□□ -0.59
Slc6a1P31648 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Slc6a1P31648 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.38□□□□□ -0.59
Slc6a1P31648 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.38□□□□□ -0.59
Slc6a1P31648 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 AA543401-201ENSMUST00000164248 1269 ntBASIC11.38□□□□□ -0.59
Slc6a1P31648 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Slc6a1P31648 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Slc6a1P31648 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.38□□□□□ -0.59
Slc6a1P31648 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.38□□□□□ -0.59
Slc6a1P31648 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.38□□□□□ -0.59
Slc6a1P31648 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.38□□□□□ -0.59
Slc6a1P31648 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Slc6a1P31648 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Slc6a1P31648 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Slc6a1P31648 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc6a1P31648 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Slc6a1P31648 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Slc6a1P31648 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.37□□□□□ -0.59
Slc6a1P31648 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc6a1P31648 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Slc6a1P31648 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.37□□□□□ -0.59
Slc6a1P31648 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc6a1P31648 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc6a1P31648 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.37□□□□□ -0.59
Slc6a1P31648 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc6a1P31648 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Slc6a1P31648 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc6a1P31648 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc6a1P31648 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc6a1P31648 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.37□□□□□ -0.59
Slc6a1P31648 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.37□□□□□ -0.59
Slc6a1P31648 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc6a1P31648 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms