Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nedd8P29595 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nedd8P29595 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nedd8P29595 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.18□□□□□ -0.46
Nedd8P29595 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.18□□□□□ -0.46
Nedd8P29595 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.18□□□□□ -0.46
Nedd8P29595 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.18□□□□□ -0.46
Nedd8P29595 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Nedd8P29595 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.18□□□□□ -0.46
Nedd8P29595 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nedd8P29595 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nedd8P29595 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.18□□□□□ -0.46
Nedd8P29595 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nedd8P29595 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nedd8P29595 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nedd8P29595 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.17□□□□□ -0.46
Nedd8P29595 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nedd8P29595 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.17□□□□□ -0.46
Nedd8P29595 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nedd8P29595 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Nedd8P29595 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Gm13823-201ENSMUST00000119930 345 ntBASIC12.17□□□□□ -0.46
Nedd8P29595 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.17□□□□□ -0.46
Nedd8P29595 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Nedd8P29595 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.17□□□□□ -0.46
Nedd8P29595 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.17□□□□□ -0.46
Nedd8P29595 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.17□□□□□ -0.46
Nedd8P29595 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.17□□□□□ -0.46
Nedd8P29595 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nedd8P29595 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Nedd8P29595 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Nedd8P29595 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nedd8P29595 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
Nedd8P29595 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Nedd8P29595 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.16□□□□□ -0.46
Nedd8P29595 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nedd8P29595 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Gm13036-201ENSMUST00000117799 748 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms