Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm5781-201ENSMUST00000219792 443 ntBASIC14.11□□□□□ -0.15
Mmp3P28862 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Mmp3P28862 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.11□□□□□ -0.15
Mmp3P28862 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mmp3P28862 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.1□□□□□ -0.15
Mmp3P28862 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.1□□□□□ -0.15
Mmp3P28862 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.1□□□□□ -0.15
Mmp3P28862 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Snord83b-201ENSMUST00000104546 94 ntBASIC14.1□□□□□ -0.15
Mmp3P28862 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.1□□□□□ -0.15
Mmp3P28862 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Gm38341-201ENSMUST00000195357 515 ntBASIC14.1□□□□□ -0.15
Mmp3P28862 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.1□□□□□ -0.15
Mmp3P28862 Gm7046-201ENSMUST00000221351 977 ntBASIC14.1□□□□□ -0.15
Mmp3P28862 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Mmp3P28862 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Mmp3P28862 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Mmp3P28862 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp3P28862 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.1□□□□□ -0.15
Mmp3P28862 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Mmp3P28862 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.1□□□□□ -0.15
Mmp3P28862 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Mmp3P28862 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Mmp3P28862 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Mmp3P28862 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mmp3P28862 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Mmp3P28862 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Mmp3P28862 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Mmp3P28862 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Mmp3P28862 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Mmp3P28862 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Mmp3P28862 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Mmp3P28862 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Mmp3P28862 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.09□□□□□ -0.15
Mmp3P28862 Gm24548-201ENSMUST00000158650 108 ntBASIC14.09□□□□□ -0.15
Mmp3P28862 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.09□□□□□ -0.15
Mmp3P28862 Gm8738-201ENSMUST00000172606 329 ntBASIC14.09□□□□□ -0.15
Mmp3P28862 Gm2991-201ENSMUST00000173338 480 ntBASIC14.09□□□□□ -0.15
Mmp3P28862 Gm22121-201ENSMUST00000175148 54 ntBASIC14.09□□□□□ -0.15
Mmp3P28862 Mospd4-201ENSMUST00000180618 576 ntBASIC14.09□□□□□ -0.15
Mmp3P28862 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.09□□□□□ -0.15
Mmp3P28862 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.09□□□□□ -0.15
Mmp3P28862 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.09□□□□□ -0.15
Mmp3P28862 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Mmp3P28862 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Mmp3P28862 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.09□□□□□ -0.15
Mmp3P28862 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.09□□□□□ -0.15
Mmp3P28862 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp3P28862 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms