Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cd40lgP27548 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cd40lgP27548 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cd40lgP27548 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd40lgP27548 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cd40lgP27548 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.23□□□□□ -0.45
Cd40lgP27548 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cd40lgP27548 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cd40lgP27548 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.23□□□□□ -0.45
Cd40lgP27548 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.23□□□□□ -0.45
Cd40lgP27548 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.23□□□□□ -0.45
Cd40lgP27548 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Gm27701-201ENSMUST00000184498 110 ntBASIC12.23□□□□□ -0.45
Cd40lgP27548 Mir7654-201ENSMUST00000185082 70 ntBASIC12.23□□□□□ -0.45
Cd40lgP27548 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Gm42550-201ENSMUST00000201553 960 ntBASIC12.23□□□□□ -0.45
Cd40lgP27548 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.23□□□□□ -0.45
Cd40lgP27548 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.23□□□□□ -0.45
Cd40lgP27548 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cd40lgP27548 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.23□□□□□ -0.45
Cd40lgP27548 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd40lgP27548 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.22□□□□□ -0.45
Cd40lgP27548 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cd40lgP27548 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Gm28911-201ENSMUST00000188837 117 ntBASIC12.22□□□□□ -0.45
Cd40lgP27548 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Gm38223-201ENSMUST00000194484 695 ntBASIC12.22□□□□□ -0.45
Cd40lgP27548 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.22□□□□□ -0.45
Cd40lgP27548 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.22□□□□□ -0.45
Cd40lgP27548 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Cd40lgP27548 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd40lgP27548 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.21□□□□□ -0.45
Cd40lgP27548 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.21□□□□□ -0.45
Cd40lgP27548 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms