Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cbx3P23198 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.03□□□□□ -0.48
Cbx3P23198 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.03□□□□□ -0.48
Cbx3P23198 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.03□□□□□ -0.48
Cbx3P23198 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cbx3P23198 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Cbx3P23198 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cbx3P23198 Gm15590-201ENSMUST00000078419 552 ntBASIC12.03□□□□□ -0.48
Cbx3P23198 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.03□□□□□ -0.48
Cbx3P23198 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cbx3P23198 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.03□□□□□ -0.48
Cbx3P23198 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.03□□□□□ -0.48
Cbx3P23198 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cbx3P23198 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cbx3P23198 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cbx3P23198 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cbx3P23198 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cbx3P23198 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cbx3P23198 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cbx3P23198 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.02□□□□□ -0.48
Cbx3P23198 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cbx3P23198 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Cbx3P23198 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.02□□□□□ -0.49
Cbx3P23198 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Mir5131-201ENSMUST00000175426 93 ntBASIC12.02□□□□□ -0.49
Cbx3P23198 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.02□□□□□ -0.49
Cbx3P23198 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.02□□□□□ -0.49
Cbx3P23198 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.02□□□□□ -0.49
Cbx3P23198 Gm2451-201ENSMUST00000199447 999 ntBASIC12.02□□□□□ -0.49
Cbx3P23198 Gm10290-201ENSMUST00000200451 999 ntBASIC12.02□□□□□ -0.49
Cbx3P23198 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.02□□□□□ -0.49
Cbx3P23198 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cbx3P23198 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.02□□□□□ -0.49
Cbx3P23198 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cbx3P23198 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cbx3P23198 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.01□□□□□ -0.49
Cbx3P23198 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.01□□□□□ -0.49
Cbx3P23198 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Cbx3P23198 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.01□□□□□ -0.49
Cbx3P23198 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.01□□□□□ -0.49
Cbx3P23198 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.01□□□□□ -0.49
Cbx3P23198 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Mir5126-201ENSMUST00000175513 77 ntBASIC12.01□□□□□ -0.49
Cbx3P23198 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.01□□□□□ -0.49
Cbx3P23198 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.01□□□□□ -0.49
Cbx3P23198 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.01□□□□□ -0.49
Cbx3P23198 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.01□□□□□ -0.49
Cbx3P23198 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.01□□□□□ -0.49
Cbx3P23198 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.01□□□□□ -0.49
Cbx3P23198 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms