Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.41□□□□□ -0.42
Clk1P22518 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clk1P22518 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Clk1P22518 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.4□□□□□ -0.42
Clk1P22518 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.4□□□□□ -0.42
Clk1P22518 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Clk1P22518 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.4□□□□□ -0.42
Clk1P22518 Gm5354-201ENSMUST00000182417 973 ntBASIC12.4□□□□□ -0.42
Clk1P22518 Gm10576-201ENSMUST00000191927 825 ntBASIC12.4□□□□□ -0.42
Clk1P22518 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.4□□□□□ -0.42
Clk1P22518 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.4□□□□□ -0.42
Clk1P22518 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.4□□□□□ -0.42
Clk1P22518 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Clk1P22518 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.4□□□□□ -0.42
Clk1P22518 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clk1P22518 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Clk1P22518 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Clk1P22518 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.39□□□□□ -0.43
Clk1P22518 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.39□□□□□ -0.43
Clk1P22518 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.39□□□□□ -0.43
Clk1P22518 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clk1P22518 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Clk1P22518 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Clk1P22518 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.39□□□□□ -0.43
Clk1P22518 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Clk1P22518 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.39□□□□□ -0.43
Clk1P22518 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Clk1P22518 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.39□□□□□ -0.43
Clk1P22518 Gm28760-201ENSMUST00000185995 736 ntBASIC12.39□□□□□ -0.43
Clk1P22518 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Clk1P22518 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.39□□□□□ -0.43
Clk1P22518 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.39□□□□□ -0.43
Clk1P22518 Gm7730-201ENSMUST00000212486 454 ntBASIC12.39□□□□□ -0.43
Clk1P22518 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.39□□□□□ -0.43
Clk1P22518 Gm5035-201ENSMUST00000215581 927 ntBASIC12.39□□□□□ -0.43
Clk1P22518 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Clk1P22518 Gm24447-201ENSMUST00000083977 338 ntBASIC12.39□□□□□ -0.43
Clk1P22518 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clk1P22518 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms