Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.69□□□□□ -0.38
Cntn1P12960 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.69□□□□□ -0.38
Cntn1P12960 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.69□□□□□ -0.38
Cntn1P12960 Gm11618-201ENSMUST00000117946 267 ntBASIC12.69□□□□□ -0.38
Cntn1P12960 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.69□□□□□ -0.38
Cntn1P12960 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.69□□□□□ -0.38
Cntn1P12960 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.69□□□□□ -0.38
Cntn1P12960 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.69□□□□□ -0.38
Cntn1P12960 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cntn1P12960 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Cntn1P12960 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cntn1P12960 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cntn1P12960 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Cntn1P12960 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.68□□□□□ -0.38
Cntn1P12960 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cntn1P12960 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.68□□□□□ -0.38
Cntn1P12960 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.68□□□□□ -0.38
Cntn1P12960 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.68□□□□□ -0.38
Cntn1P12960 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Cntn1P12960 Gm37922-201ENSMUST00000195596 455 ntBASIC12.68□□□□□ -0.38
Cntn1P12960 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Cntn1P12960 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.68□□□□□ -0.38
Cntn1P12960 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.68□□□□□ -0.38
Cntn1P12960 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.68□□□□□ -0.38
Cntn1P12960 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Cntn1P12960 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cntn1P12960 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.68□□□□□ -0.38
Cntn1P12960 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cntn1P12960 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cntn1P12960 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.67□□□□□ -0.38
Cntn1P12960 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Cntn1P12960 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.67□□□□□ -0.38
Cntn1P12960 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cntn1P12960 Gm12384-201ENSMUST00000119228 919 ntBASIC12.67□□□□□ -0.38
Cntn1P12960 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.67□□□□□ -0.38
Cntn1P12960 Snora78-201ENSMUST00000158630 128 ntBASIC12.67□□□□□ -0.38
Cntn1P12960 Gm4271-201ENSMUST00000174444 973 ntBASIC12.67□□□□□ -0.38
Cntn1P12960 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.67□□□□□ -0.38
Cntn1P12960 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.67□□□□□ -0.38
Cntn1P12960 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.67□□□□□ -0.38
Cntn1P12960 Gm43630-201ENSMUST00000201550 776 ntBASIC12.67□□□□□ -0.38
Cntn1P12960 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.67□□□□□ -0.38
Cntn1P12960 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Cntn1P12960 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cntn1P12960 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms