Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ApoeP08226 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ApoeP08226 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
ApoeP08226 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.52□□□□□ -0.41
ApoeP08226 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ApoeP08226 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
ApoeP08226 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.51□□□□□ -0.41
ApoeP08226 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ApoeP08226 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Gm12585-201ENSMUST00000117307 290 ntBASIC12.51□□□□□ -0.41
ApoeP08226 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Gm28630-201ENSMUST00000187806 498 ntBASIC12.51□□□□□ -0.41
ApoeP08226 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
ApoeP08226 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Pck2-205ENSMUST00000226352 2784 ntBASIC12.51□□□□□ -0.41
ApoeP08226 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.51□□□□□ -0.41
ApoeP08226 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ApoeP08226 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.5□□□□□ -0.41
ApoeP08226 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ApoeP08226 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Gm11779-201ENSMUST00000118541 368 ntBASIC12.5□□□□□ -0.41
ApoeP08226 Gm27772-201ENSMUST00000184900 187 ntBASIC12.5□□□□□ -0.41
ApoeP08226 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.5□□□□□ -0.41
ApoeP08226 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ApoeP08226 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ApoeP08226 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.5□□□□□ -0.41
ApoeP08226 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms