Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.6□□□□□ -0.55
P04224 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.6□□□□□ -0.55
P04224 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.6□□□□□ -0.55
P04224 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
P04224 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.6□□□□□ -0.55
P04224 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
P04224 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
P04224 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
P04224 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
P04224 Gm13823-201ENSMUST00000119930 345 ntBASIC11.6□□□□□ -0.55
P04224 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.6□□□□□ -0.55
P04224 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.6□□□□□ -0.55
P04224 AA619741-201ENSMUST00000195095 646 ntBASIC11.6□□□□□ -0.55
P04224 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.6□□□□□ -0.55
P04224 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.6□□□□□ -0.55
P04224 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
P04224 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
P04224 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
P04224 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
P04224 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P04224 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
P04224 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
P04224 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.59□□□□□ -0.55
P04224 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
P04224 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.59□□□□□ -0.55
P04224 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.59□□□□□ -0.55
P04224 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.59□□□□□ -0.55
P04224 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.59□□□□□ -0.55
P04224 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.59□□□□□ -0.55
P04224 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.59□□□□□ -0.55
P04224 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.59□□□□□ -0.55
P04224 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.59□□□□□ -0.55
P04224 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
P04224 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
P04224 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.59□□□□□ -0.55
P04224 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.59□□□□□ -0.55
P04224 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
P04224 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.59□□□□□ -0.55
P04224 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.59□□□□□ -0.55
P04224 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
P04224 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
P04224 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms