Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt1P04104 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Krt1P04104 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Krt1P04104 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt1P04104 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt1P04104 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Krt1P04104 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.48□□□□□ -0.41
Krt1P04104 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Krt1P04104 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Gm27628-201ENSMUST00000184911 107 ntBASIC12.48□□□□□ -0.41
Krt1P04104 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.48□□□□□ -0.41
Krt1P04104 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Krt1P04104 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Krt1P04104 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Krt1P04104 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.48□□□□□ -0.41
Krt1P04104 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Krt1P04104 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt1P04104 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
Krt1P04104 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.47□□□□□ -0.41
Krt1P04104 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Krt1P04104 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Krt1P04104 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Krt1P04104 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Krt1P04104 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Krt1P04104 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.47□□□□□ -0.41
Krt1P04104 Gm1401-201ENSMUST00000122048 772 ntBASIC12.47□□□□□ -0.41
Krt1P04104 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Krt1P04104 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Krt1P04104 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Krt1P04104 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.47□□□□□ -0.41
Krt1P04104 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.47□□□□□ -0.41
Krt1P04104 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Krt1P04104 Gm15590-201ENSMUST00000078419 552 ntBASIC12.47□□□□□ -0.41
Krt1P04104 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Krt1P04104 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Krt1P04104 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.47□□□□□ -0.41
Krt1P04104 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt1P04104 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.47□□□□□ -0.41
Krt1P04104 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.47□□□□□ -0.41
Krt1P04104 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.47□□□□□ -0.41
Krt1P04104 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.47□□□□□ -0.41
Krt1P04104 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Krt1P04104 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.46□□□□□ -0.41
Krt1P04104 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Krt1P04104 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt1P04104 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.46□□□□□ -0.41
Krt1P04104 Gm45453-201ENSMUST00000211758 853 ntBASIC12.46□□□□□ -0.41
Krt1P04104 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms