Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Hbb-b1P02088 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Hbb-b1P02088 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Hbb-b1P02088 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
Hbb-b1P02088 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.27□□□□□ -0.93
Hbb-b1P02088 Rbfox2-207ENSMUST00000227533 1041 ntBASIC9.27□□□□□ -0.93
Hbb-b1P02088 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Map1b-203ENSMUST00000223725 2669 ntBASIC9.27□□□□□ -0.93
Hbb-b1P02088 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Hbb-b1P02088 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.26□□□□□ -0.93
Hbb-b1P02088 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.26□□□□□ -0.93
Hbb-b1P02088 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Gm17808-201ENSMUST00000200859 894 ntBASIC9.26□□□□□ -0.93
Hbb-b1P02088 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.26□□□□□ -0.93
Hbb-b1P02088 Spcs1-207ENSMUST00000228767 1008 ntBASIC9.26□□□□□ -0.93
Hbb-b1P02088 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.26□□□□□ -0.93
Hbb-b1P02088 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.26□□□□□ -0.93
Hbb-b1P02088 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Gm5366-201ENSMUST00000215494 1338 ntBASIC9.26□□□□□ -0.93
Hbb-b1P02088 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.26□□□□□ -0.93
Hbb-b1P02088 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hbb-b1P02088 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms