Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hcn1O88704 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hcn1O88704 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.69□□□□□ -0.38
Hcn1O88704 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.69□□□□□ -0.38
Hcn1O88704 Gm27772-201ENSMUST00000184900 187 ntBASIC12.69□□□□□ -0.38
Hcn1O88704 Gm8515-201ENSMUST00000194852 576 ntBASIC12.69□□□□□ -0.38
Hcn1O88704 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.69□□□□□ -0.38
Hcn1O88704 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Hcn1O88704 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.69□□□□□ -0.38
Hcn1O88704 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hcn1O88704 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hcn1O88704 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hcn1O88704 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.69□□□□□ -0.38
Hcn1O88704 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcn1O88704 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hcn1O88704 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.68□□□□□ -0.38
Hcn1O88704 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.68□□□□□ -0.38
Hcn1O88704 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.68□□□□□ -0.38
Hcn1O88704 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.68□□□□□ -0.38
Hcn1O88704 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Hcn1O88704 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.68□□□□□ -0.38
Hcn1O88704 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.68□□□□□ -0.38
Hcn1O88704 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Gm23984-201ENSMUST00000157139 203 ntBASIC12.68□□□□□ -0.38
Hcn1O88704 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.68□□□□□ -0.38
Hcn1O88704 Mir6392-201ENSMUST00000184924 108 ntBASIC12.68□□□□□ -0.38
Hcn1O88704 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Hcn1O88704 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Gm18018-201ENSMUST00000198273 408 ntBASIC12.68□□□□□ -0.38
Hcn1O88704 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.68□□□□□ -0.38
Hcn1O88704 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.68□□□□□ -0.38
Hcn1O88704 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Gm6180-201ENSMUST00000065243 498 ntBASIC12.68□□□□□ -0.38
Hcn1O88704 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Hcn1O88704 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Hcn1O88704 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hcn1O88704 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hcn1O88704 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcn1O88704 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.67□□□□□ -0.38
Hcn1O88704 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.67□□□□□ -0.38
Hcn1O88704 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.67□□□□□ -0.38
Hcn1O88704 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.67□□□□□ -0.38
Hcn1O88704 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.67□□□□□ -0.38
Hcn1O88704 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hcn1O88704 Gm12341-201ENSMUST00000119724 503 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms