Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm10226O88253 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm10226O88253 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.18□□□□□ -0.78
Gm10226O88253 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm10226O88253 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Gm10226O88253 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.17□□□□□ -0.78
Gm10226O88253 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.17□□□□□ -0.78
Gm10226O88253 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.17□□□□□ -0.78
Gm10226O88253 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.17□□□□□ -0.78
Gm10226O88253 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Gm10226O88253 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Gm10226O88253 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.17□□□□□ -0.78
Gm10226O88253 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Mir686-201ENSMUST00000102174 109 ntBASIC10.17□□□□□ -0.78
Gm10226O88253 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Gm10226O88253 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.17□□□□□ -0.78
Gm10226O88253 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.17□□□□□ -0.78
Gm10226O88253 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.17□□□□□ -0.78
Gm10226O88253 Gm8062-201ENSMUST00000139696 444 ntBASIC10.17□□□□□ -0.78
Gm10226O88253 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.17□□□□□ -0.78
Gm10226O88253 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Gm10226O88253 Gm37042-201ENSMUST00000193816 581 ntBASIC10.17□□□□□ -0.78
Gm10226O88253 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.17□□□□□ -0.78
Gm10226O88253 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.17□□□□□ -0.78
Gm10226O88253 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.17□□□□□ -0.78
Gm10226O88253 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.17□□□□□ -0.78
Gm10226O88253 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Gm10226O88253 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Gm10226O88253 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.17□□□□□ -0.78
Gm10226O88253 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Gm10226O88253 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Gm10226O88253 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Gm10226O88253 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm10226O88253 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Gm10226O88253 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Gm10226O88253 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.16□□□□□ -0.78
Gm10226O88253 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.16□□□□□ -0.78
Gm10226O88253 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Gm10226O88253 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.16□□□□□ -0.78
Gm10226O88253 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Gm10226O88253 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Gm10226O88253 Gm23931-201ENSMUST00000103842 109 ntBASIC10.16□□□□□ -0.78
Gm10226O88253 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Gm10226O88253 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.16□□□□□ -0.78
Gm10226O88253 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm10226O88253 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.16□□□□□ -0.78
Gm10226O88253 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms