Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rnf13O54965 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Rnf13O54965 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rnf13O54965 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf13O54965 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Rnf13O54965 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rnf13O54965 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.99□□□□□ -0.49
Rnf13O54965 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.99□□□□□ -0.49
Rnf13O54965 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.99□□□□□ -0.49
Rnf13O54965 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Rnf13O54965 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Rnf13O54965 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rnf13O54965 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.99□□□□□ -0.49
Rnf13O54965 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.99□□□□□ -0.49
Rnf13O54965 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
Rnf13O54965 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.99□□□□□ -0.49
Rnf13O54965 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf13O54965 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rnf13O54965 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.98□□□□□ -0.49
Rnf13O54965 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rnf13O54965 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rnf13O54965 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.98□□□□□ -0.49
Rnf13O54965 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Rnf13O54965 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.98□□□□□ -0.49
Rnf13O54965 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.98□□□□□ -0.49
Rnf13O54965 Gm15240-201ENSMUST00000118156 720 ntBASIC11.98□□□□□ -0.49
Rnf13O54965 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.98□□□□□ -0.49
Rnf13O54965 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.98□□□□□ -0.49
Rnf13O54965 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rnf13O54965 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rnf13O54965 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rnf13O54965 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf13O54965 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf13O54965 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf13O54965 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf13O54965 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf13O54965 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf13O54965 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf13O54965 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf13O54965 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms