Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.22□□□□□ -0.13
Nr1i3O35627 Mir7023-201ENSMUST00000185093 64 ntBASIC14.22□□□□□ -0.13
Nr1i3O35627 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Gm19220-201ENSMUST00000222682 803 ntBASIC14.22□□□□□ -0.13
Nr1i3O35627 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.22□□□□□ -0.13
Nr1i3O35627 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.22□□□□□ -0.13
Nr1i3O35627 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.22□□□□□ -0.13
Nr1i3O35627 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.22□□□□□ -0.13
Nr1i3O35627 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nr1i3O35627 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Nr1i3O35627 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.22□□□□□ -0.13
Nr1i3O35627 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.22□□□□□ -0.13
Nr1i3O35627 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.22□□□□□ -0.13
Nr1i3O35627 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1i3O35627 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Nr1i3O35627 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Nr1i3O35627 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nr1i3O35627 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Nr1i3O35627 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nr1i3O35627 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.21□□□□□ -0.13
Nr1i3O35627 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.21□□□□□ -0.13
Nr1i3O35627 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.21□□□□□ -0.13
Nr1i3O35627 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Gm42612-201ENSMUST00000197986 623 ntBASIC14.21□□□□□ -0.13
Nr1i3O35627 Gm43170-201ENSMUST00000199827 612 ntBASIC14.21□□□□□ -0.13
Nr1i3O35627 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.21□□□□□ -0.13
Nr1i3O35627 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.21□□□□□ -0.13
Nr1i3O35627 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nr1i3O35627 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.21□□□□□ -0.13
Nr1i3O35627 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1i3O35627 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nr1i3O35627 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nr1i3O35627 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nr1i3O35627 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nr1i3O35627 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nr1i3O35627 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.21□□□□□ -0.14
Nr1i3O35627 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nr1i3O35627 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.2□□□□□ -0.14
Nr1i3O35627 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nr1i3O35627 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.2□□□□□ -0.14
Nr1i3O35627 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.2□□□□□ -0.14
Nr1i3O35627 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.2□□□□□ -0.14
Nr1i3O35627 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.2□□□□□ -0.14
Nr1i3O35627 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1i3O35627 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nr1i3O35627 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nr1i3O35627 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nr1i3O35627 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.19□□□□□ -0.14
Nr1i3O35627 Gm7730-201ENSMUST00000212486 454 ntBASIC14.19□□□□□ -0.14
Nr1i3O35627 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.19□□□□□ -0.14
Nr1i3O35627 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nr1i3O35627 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1i3O35627 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms