Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Slc1a6O35544 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.03□□□□□ -0.32
Slc1a6O35544 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.03□□□□□ -0.32
Slc1a6O35544 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.03□□□□□ -0.32
Slc1a6O35544 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Mir449b-201ENSMUST00000104833 80 ntBASIC13.03□□□□□ -0.32
Slc1a6O35544 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.03□□□□□ -0.32
Slc1a6O35544 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Gm43703-201ENSMUST00000200523 763 ntBASIC13.03□□□□□ -0.32
Slc1a6O35544 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.03□□□□□ -0.32
Slc1a6O35544 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.03□□□□□ -0.32
Slc1a6O35544 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Slc1a6O35544 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.03□□□□□ -0.32
Slc1a6O35544 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.03□□□□□ -0.32
Slc1a6O35544 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Slc1a6O35544 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.03□□□□□ -0.32
Slc1a6O35544 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.03□□□□□ -0.32
Slc1a6O35544 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc1a6O35544 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Slc1a6O35544 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc1a6O35544 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.02□□□□□ -0.32
Slc1a6O35544 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc1a6O35544 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.02□□□□□ -0.32
Slc1a6O35544 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc1a6O35544 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc1a6O35544 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.02□□□□□ -0.32
Slc1a6O35544 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc1a6O35544 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Slc1a6O35544 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc1a6O35544 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Slc1a6O35544 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.02□□□□□ -0.33
Slc1a6O35544 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Gm27525-201ENSMUST00000184465 107 ntBASIC13.02□□□□□ -0.33
Slc1a6O35544 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.02□□□□□ -0.33
Slc1a6O35544 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.02□□□□□ -0.33
Slc1a6O35544 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Slc1a6O35544 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Slc1a6O35544 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Slc1a6O35544 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc1a6O35544 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.02□□□□□ -0.33
Slc1a6O35544 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Gm27321-201ENSMUST00000185021 205 ntBASIC13.01□□□□□ -0.33
Slc1a6O35544 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.01□□□□□ -0.33
Slc1a6O35544 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.01□□□□□ -0.33
Slc1a6O35544 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms