Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcof1O08784 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcof1O08784 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcof1O08784 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Tcof1O08784 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.46■□□□□ 0.07
Tcof1O08784 Gm23931-201ENSMUST00000103842 109 ntBASIC15.46■□□□□ 0.07
Tcof1O08784 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.46■□□□□ 0.07
Tcof1O08784 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Tcof1O08784 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.46■□□□□ 0.07
Tcof1O08784 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.46■□□□□ 0.07
Tcof1O08784 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Tcof1O08784 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.46■□□□□ 0.07
Tcof1O08784 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.46■□□□□ 0.07
Tcof1O08784 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Tcof1O08784 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.46■□□□□ 0.07
Tcof1O08784 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.46■□□□□ 0.07
Tcof1O08784 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcof1O08784 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Tcof1O08784 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Tcof1O08784 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.46■□□□□ 0.06
Tcof1O08784 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Tcof1O08784 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Tcof1O08784 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Tcof1O08784 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Tcof1O08784 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Gm11978-201ENSMUST00000122315 466 ntBASIC15.45■□□□□ 0.06
Tcof1O08784 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.45■□□□□ 0.06
Tcof1O08784 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.45■□□□□ 0.06
Tcof1O08784 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Gm7029-201ENSMUST00000173226 450 ntBASIC15.45■□□□□ 0.06
Tcof1O08784 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Tcof1O08784 Gm27682-201ENSMUST00000183930 110 ntBASIC15.45■□□□□ 0.06
Tcof1O08784 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.45■□□□□ 0.06
Tcof1O08784 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Gm10146-201ENSMUST00000072739 309 ntBASIC15.45■□□□□ 0.06
Tcof1O08784 Gm16372-201ENSMUST00000073088 450 ntBASIC15.45■□□□□ 0.06
Tcof1O08784 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Tcof1O08784 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Tcof1O08784 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.45■□□□□ 0.06
Tcof1O08784 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Tcof1O08784 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.45■□□□□ 0.06
Tcof1O08784 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Tcof1O08784 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.45■□□□□ 0.06
Tcof1O08784 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.45■□□□□ 0.06
Tcof1O08784 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.45■□□□□ 0.06
Tcof1O08784 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Tcof1O08784 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Tcof1O08784 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.45■□□□□ 0.06
Tcof1O08784 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.45■□□□□ 0.06
Tcof1O08784 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Tcof1O08784 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcof1O08784 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.44■□□□□ 0.06
Tcof1O08784 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Tcof1O08784 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.44■□□□□ 0.06
Tcof1O08784 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Tcof1O08784 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.44■□□□□ 0.06
Tcof1O08784 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms