Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh9F8VPK8 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Pcdh9F8VPK8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh9F8VPK8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Gm16215-201ENSMUST00000161990 637 ntBASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh9F8VPK8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms