Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cpsf4lE9Q2N0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Gm16202-201ENSMUST00000117532 544 ntBASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Proscos-202ENSMUST00000178990 666 ntBASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cpsf4lE9Q2N0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm11478-201ENSMUST00000117851 599 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm8652-201ENSMUST00000181363 964 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm19931-201ENSMUST00000198920 368 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm5035-201ENSMUST00000215581 927 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm17794-201ENSMUST00000220252 955 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm16372-201ENSMUST00000073088 450 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms