Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdr1E9Q0B4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13□□□□□ -0.33
Cdr1E9Q0B4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Gm6539-201ENSMUST00000119157 1064 ntBASIC13□□□□□ -0.33
Cdr1E9Q0B4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Gm34391-201ENSMUST00000203706 907 ntBASIC13□□□□□ -0.33
Cdr1E9Q0B4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 AC090659.1-201ENSMUST00000224334 768 ntBASIC13□□□□□ -0.33
Cdr1E9Q0B4 AC131187.1-201ENSMUST00000224567 809 ntBASIC13□□□□□ -0.33
Cdr1E9Q0B4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cdr1E9Q0B4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdr1E9Q0B4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms