Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Gm11956-201ENSMUST00000119525 512 ntBASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Gm4654-201ENSMUST00000183305 982 ntBASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Gm14213-201ENSMUST00000119778 768 ntBASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a3E9PWQ3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a3E9PWQ3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a3E9PWQ3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a3E9PWQ3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Col6a3E9PWQ3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Col6a3E9PWQ3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a3E9PWQ3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Gm17070-201ENSMUST00000170463 784 ntBASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Mir7677-201ENSMUST00000184226 67 ntBASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 BC106175-202ENSMUST00000219344 1213 ntBASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Gm18552-201ENSMUST00000187425 538 ntBASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Gm43912-201ENSMUST00000204352 538 ntBASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Gm44647-201ENSMUST00000207402 428 ntBASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Gm5805-201ENSMUST00000072779 456 ntBASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms