Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Gm44999-201ENSMUST00000207456 1493 ntBASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hfm1D3Z4R1 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm43823-201ENSMUST00000197391 1808 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm23949-201ENSMUST00000104027 127 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm29615-201ENSMUST00000185371 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm28224-201ENSMUST00000186078 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm29001-201ENSMUST00000186177 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm28292-201ENSMUST00000186593 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm7593-201ENSMUST00000187246 644 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm28101-201ENSMUST00000187608 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm29076-201ENSMUST00000187689 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm28302-201ENSMUST00000187931 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm28646-201ENSMUST00000188220 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm28205-201ENSMUST00000189177 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm29032-201ENSMUST00000189797 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm28695-201ENSMUST00000190300 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm37448-201ENSMUST00000192795 697 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Gm21027-201ENSMUST00000219300 1236 ntBASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC18.23■□□□□ 0.51
Hfm1D3Z4R1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Gm6039-201ENSMUST00000121667 1250 ntBASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Gm14665-201ENSMUST00000122294 557 ntBASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Gm19459-201ENSMUST00000176240 835 ntBASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Gm8494-201ENSMUST00000178171 1233 ntBASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms