Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Gm13316-201ENSMUST00000140537 691 ntBASIC11.85□□□□□ -0.51
Shank1D3YZU1 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Gm37042-201ENSMUST00000193816 581 ntBASIC11.85□□□□□ -0.51
Shank1D3YZU1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Gm8959-201ENSMUST00000213150 571 ntBASIC11.85□□□□□ -0.51
Shank1D3YZU1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shank1D3YZU1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.84□□□□□ -0.51
Shank1D3YZU1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.84□□□□□ -0.51
Shank1D3YZU1 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Shank1D3YZU1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Shank1D3YZU1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Shank1D3YZU1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Shank1D3YZU1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.83□□□□□ -0.52
Shank1D3YZU1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.83□□□□□ -0.52
Shank1D3YZU1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Gm8805-201ENSMUST00000117848 313 ntBASIC11.83□□□□□ -0.52
Shank1D3YZU1 Gm14208-201ENSMUST00000119645 678 ntBASIC11.83□□□□□ -0.52
Shank1D3YZU1 Gm14726-201ENSMUST00000120623 896 ntBASIC11.83□□□□□ -0.52
Shank1D3YZU1 Gm12566-201ENSMUST00000121479 359 ntBASIC11.83□□□□□ -0.52
Shank1D3YZU1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Gm38317-201ENSMUST00000195564 343 ntBASIC11.83□□□□□ -0.52
Shank1D3YZU1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms