Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Gm13408-201ENSMUST00000119822 798 ntBASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Gm13935-201ENSMUST00000121859 798 ntBASIC13.32□□□□□ -0.28
Col4a6B1AVK5 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Gm19353-201ENSMUST00000184561 445 ntBASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Gm45118-201ENSMUST00000208928 825 ntBASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col4a6B1AVK5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm28882-201ENSMUST00000185504 314 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm3508-201ENSMUST00000186012 792 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm44551-201ENSMUST00000208804 171 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm15515-201ENSMUST00000117827 822 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm15703-201ENSMUST00000120250 880 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm12208-201ENSMUST00000122004 163 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Ntng1-201ENSMUST00000051253 327 ntBASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col4a6B1AVK5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms