Protein–RNA interactions for Protein: B1AS29

Grik3, Glutamate receptor ionotropic, kainate 3, mousemouse

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Grik3B1AS29 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.23□□□□□ -0.13
Grik3B1AS29 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Grik3B1AS29 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Grik3B1AS29 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.23□□□□□ -0.13
Grik3B1AS29 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.23□□□□□ -0.13
Grik3B1AS29 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.23□□□□□ -0.13
Grik3B1AS29 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.23□□□□□ -0.13
Grik3B1AS29 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.23□□□□□ -0.13
Grik3B1AS29 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Grik3B1AS29 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Grik3B1AS29 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Grik3B1AS29 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Grik3B1AS29 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.22□□□□□ -0.13
Grik3B1AS29 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.22□□□□□ -0.13
Grik3B1AS29 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Grik3B1AS29 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Gm16202-201ENSMUST00000117532 544 ntBASIC14.22□□□□□ -0.13
Grik3B1AS29 Gm6447-201ENSMUST00000118905 835 ntBASIC14.22□□□□□ -0.13
Grik3B1AS29 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Grik3B1AS29 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Gm26927-201ENSMUST00000182385 965 ntBASIC14.22□□□□□ -0.13
Grik3B1AS29 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Gm44069-201ENSMUST00000204898 506 ntBASIC14.22□□□□□ -0.13
Grik3B1AS29 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.22□□□□□ -0.13
Grik3B1AS29 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Grik3B1AS29 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Grik3B1AS29 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.21□□□□□ -0.13
Grik3B1AS29 Gm13123-201ENSMUST00000122173 492 ntBASIC14.21□□□□□ -0.13
Grik3B1AS29 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.21□□□□□ -0.13
Grik3B1AS29 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.21□□□□□ -0.13
Grik3B1AS29 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.21□□□□□ -0.13
Grik3B1AS29 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.21□□□□□ -0.13
Grik3B1AS29 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.21□□□□□ -0.13
Grik3B1AS29 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.21□□□□□ -0.13
Grik3B1AS29 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.21□□□□□ -0.13
Grik3B1AS29 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Grik3B1AS29 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Grik3B1AS29 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms