Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Gm11524-201ENSMUST00000119349 807 ntBASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Gm15376-201ENSMUST00000122258 783 ntBASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Gm27989-201ENSMUST00000184721 107 ntBASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Gm19931-201ENSMUST00000198920 368 ntBASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Gm20445-201ENSMUST00000061905 565 ntBASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.12■□□□□ 0.01
Ccdc112A0AUP1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Gm29667-201ENSMUST00000190817 490 ntBASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc112A0AUP1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Gm15487-201ENSMUST00000122373 465 ntBASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Gm29608-201ENSMUST00000190444 463 ntBASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Gm9797-201ENSMUST00000052902 613 ntBASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc112A0AUP1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Gm27838-201ENSMUST00000184829 128 ntBASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms