Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Mir686-201ENSMUST00000102174 109 ntBASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm11618-201ENSMUST00000117946 267 ntBASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm28693-202ENSMUST00000190758 331 ntBASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Atg4a-psA0A0G2JFS9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm8805-201ENSMUST00000117848 313 ntBASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm12203-201ENSMUST00000118235 598 ntBASIC16.01■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm11814-201ENSMUST00000119515 929 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms