Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm45751-201ENSMUST00000210185 1573 ntBASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm14767-201ENSMUST00000121559 586 ntBASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 AA543401-201ENSMUST00000164248 1269 ntBASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm27631-201ENSMUST00000184163 466 ntBASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav6n-6A0A075B6B2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm29541-201ENSMUST00000191351 678 ntBASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav6n-6A0A075B6B2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms