Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.63□□□□□ -0.23
Speer3W4VSP1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Speer3W4VSP1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Speer3W4VSP1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Speer3W4VSP1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Speer3W4VSP1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Speer3W4VSP1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Speer3W4VSP1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.62□□□□□ -0.23
Speer3W4VSP1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm24541-201ENSMUST00000103871 96 ntBASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Mir6956-201ENSMUST00000183598 62 ntBASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm37017-201ENSMUST00000195266 747 ntBASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm6916-202ENSMUST00000205523 195 ntBASIC13.62□□□□□ -0.23
Speer3W4VSP1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm6888-201ENSMUST00000221983 706 ntBASIC13.62□□□□□ -0.23
Speer3W4VSP1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.62□□□□□ -0.23
Speer3W4VSP1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.62□□□□□ -0.23
Speer3W4VSP1 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.62□□□□□ -0.23
Speer3W4VSP1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Gm3344-201ENSMUST00000169610 603 ntBASIC13.61□□□□□ -0.23
Speer3W4VSP1 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Gm22993-201ENSMUST00000175423 254 ntBASIC13.61□□□□□ -0.23
Speer3W4VSP1 Gm27533-201ENSMUST00000183800 152 ntBASIC13.61□□□□□ -0.23
Speer3W4VSP1 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Gm44344-201ENSMUST00000200287 129 ntBASIC13.61□□□□□ -0.23
Speer3W4VSP1 Gm44872-201ENSMUST00000207864 420 ntBASIC13.61□□□□□ -0.23
Speer3W4VSP1 CT572999.1-201ENSMUST00000220315 1260 ntBASIC13.61□□□□□ -0.23
Speer3W4VSP1 Gm9229-201ENSMUST00000222777 126 ntBASIC13.61□□□□□ -0.23
Speer3W4VSP1 Shd-206ENSMUST00000225145 998 ntBASIC13.61□□□□□ -0.23
Speer3W4VSP1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.61□□□□□ -0.23
Speer3W4VSP1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Speer3W4VSP1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.6□□□□□ -0.23
Speer3W4VSP1 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Speer3W4VSP1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Speer3W4VSP1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms