Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ercc4Q9QZD4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Gm15920-201ENSMUST00000118998 402 ntBASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Gm17330-201ENSMUST00000221047 165 ntBASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Gm9797-201ENSMUST00000052902 613 ntBASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ercc4Q9QZD4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Gm12485-201ENSMUST00000119641 291 ntBASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Gm45841-201ENSMUST00000207700 164 ntBASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ercc4Q9QZD4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Gm27772-201ENSMUST00000184900 187 ntBASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.36□□□□□ -0.11
Ercc4Q9QZD4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms