Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.71□□□□□ -0.37
Ube4bQ9ES00 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.71□□□□□ -0.37
Ube4bQ9ES00 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.71□□□□□ -0.37
Ube4bQ9ES00 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube4bQ9ES00 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube4bQ9ES00 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube4bQ9ES00 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube4bQ9ES00 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube4bQ9ES00 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube4bQ9ES00 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ube4bQ9ES00 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ube4bQ9ES00 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ube4bQ9ES00 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.7□□□□□ -0.38
Ube4bQ9ES00 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Gm6973-201ENSMUST00000117080 721 ntBASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Gm11779-201ENSMUST00000118541 368 ntBASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Gm14494-201ENSMUST00000118786 435 ntBASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Gm18737-201ENSMUST00000173594 937 ntBASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Gm27920-201ENSMUST00000183953 96 ntBASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Gm6443-201ENSMUST00000203599 874 ntBASIC12.69□□□□□ -0.38
Ube4bQ9ES00 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ube4bQ9ES00 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube4bQ9ES00 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms