Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4bQ9D8B3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Itm2b-204ENSMUST00000228637 783 ntBASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4bQ9D8B3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Gm5687-201ENSMUST00000118252 640 ntBASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Gm15429-201ENSMUST00000151268 798 ntBASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Gm45668-201ENSMUST00000211271 493 ntBASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp4bQ9D8B3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.66■□□□□ 0.26
Chmp4bQ9D8B3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms