Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.39□□□□□ -0.27
Sf3a3Q9D554 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 BC001981-202ENSMUST00000191393 1545 ntBASIC13.39□□□□□ -0.27
Sf3a3Q9D554 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.39□□□□□ -0.27
Sf3a3Q9D554 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Gm11543-201ENSMUST00000120758 370 ntBASIC13.38□□□□□ -0.27
Sf3a3Q9D554 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Gm44492-201ENSMUST00000197012 141 ntBASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Sf3a3Q9D554 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.37□□□□□ -0.27
Sf3a3Q9D554 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.37□□□□□ -0.27
Sf3a3Q9D554 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms