Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx56Q9D0R4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Gm18018-201ENSMUST00000198273 408 ntBASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx56Q9D0R4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Gm19931-201ENSMUST00000198920 368 ntBASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Itm2b-204ENSMUST00000228637 783 ntBASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx56Q9D0R4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms