Protein–RNA interactions for Protein: Q9CYZ8

Ssbp2, Single-stranded DNA-binding protein 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp2Q9CYZ8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Gm10576-201ENSMUST00000191927 825 ntBASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Gm17330-201ENSMUST00000221047 165 ntBASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ssbp2Q9CYZ8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gm11524-201ENSMUST00000119349 807 ntBASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gm5161-201ENSMUST00000075243 853 ntBASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ssbp2Q9CYZ8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Gm5354-201ENSMUST00000182417 973 ntBASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Gm27437-201ENSMUST00000183429 107 ntBASIC10.66□□□□□ -0.7
Ssbp2Q9CYZ8 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms