Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.73□□□□□ -0.37
Khdc3Q9CWU5 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc3Q9CWU5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Gm12341-201ENSMUST00000119724 503 ntBASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Gm38144-201ENSMUST00000192790 465 ntBASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Gm37917-201ENSMUST00000194711 392 ntBASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.71□□□□□ -0.37
Khdc3Q9CWU5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Khdc3Q9CWU5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.71□□□□□ -0.38
Khdc3Q9CWU5 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Khdc3Q9CWU5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms