Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Gm13223-201ENSMUST00000118609 747 ntBASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Gm44719-201ENSMUST00000206404 149 ntBASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Mir497b-201ENSMUST00000093601 125 ntBASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx28Q9CWT6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Gm12585-201ENSMUST00000117307 290 ntBASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Gm15393-201ENSMUST00000120499 219 ntBASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Gm4804-201ENSMUST00000182234 999 ntBASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx28Q9CWT6 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Mir698-201ENSMUST00000102164 109 ntBASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.42□□□□□ -0.42
Ddx28Q9CWT6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms