Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc1aQ9CU62 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Gm17794-201ENSMUST00000220252 955 ntBASIC14.84□□□□□ -0.03
Smc1aQ9CU62 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc1aQ9CU62 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.03
Smc1aQ9CU62 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smc1aQ9CU62 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smc1aQ9CU62 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Smc1aQ9CU62 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smc1aQ9CU62 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Mir1894-201ENSMUST00000122802 81 ntBASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc1aQ9CU62 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms