Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Gm5356-201ENSMUST00000093326 615 ntBASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Pck2-205ENSMUST00000226352 2784 ntBASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sft2d3Q9CSV6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Gm15678-201ENSMUST00000117573 960 ntBASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Gm15824-201ENSMUST00000119516 955 ntBASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Sft2d3Q9CSV6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Gm12485-201ENSMUST00000119641 291 ntBASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sft2d3Q9CSV6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms