Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Gm15429-201ENSMUST00000151268 798 ntBASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Gm27701-201ENSMUST00000184498 110 ntBASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Gm42550-201ENSMUST00000201553 960 ntBASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Gm17330-201ENSMUST00000221047 165 ntBASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Gm24447-201ENSMUST00000083977 338 ntBASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Mrpl35Q9CQL6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gm29608-201ENSMUST00000190444 463 ntBASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gm38223-201ENSMUST00000194484 695 ntBASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Mrpl35Q9CQL6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl35Q9CQL6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl35Q9CQL6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl35Q9CQL6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl35Q9CQL6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl35Q9CQL6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Mrpl35Q9CQL6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl35Q9CQL6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Mrpl35Q9CQL6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Mrpl35Q9CQL6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms