Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Gm27301-201ENSMUST00000184012 127 ntBASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rpl39lQ9CQD0 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Rpl39lQ9CQD0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Gm13597-201ENSMUST00000121239 375 ntBASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Gm6376-201ENSMUST00000209407 580 ntBASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39lQ9CQD0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms