Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ska1Q9CPV1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Gm12585-201ENSMUST00000117307 290 ntBASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ska1Q9CPV1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Gm27680-201ENSMUST00000184192 160 ntBASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Gm44344-201ENSMUST00000200287 129 ntBASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ska1Q9CPV1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms